BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E02SP1|AL425868
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1760 1568 0.0
>3x_Contig1760
Length = 27266
Score = 1568 bits (791), Expect = 0.0
Identities = 791/791 (100%)
Strand = Plus / Minus
Query: 1 aattccacattcaccataccgcgacgcttttgttgttcctccatggctgccatacgttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21722 aattccacattcaccataccgcgacgcttttgttgttcctccatggctgccatacgttgc 21663
Query: 61 catactttaagggactcttctggatggaaacatgcacgagacataaccatcaatccaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21662 catactttaagggactcttctggatggaaacatgcacgagacataaccatcaatccaata 21603
Query: 121 taatcagcctcagtttccatttccctcgaagctggcattctgaccaacccatctactaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21602 taatcagcctcagtttccatttccctcgaagctggcattctgaccaacccatctactaga 21543
Query: 181 agtctgttgatcccatctaatccggtgactgcatatatcaatgctcccagaatagagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21542 agtctgttgatcccatctaatccggtgactgcatatatcaatgctcccagaatagagtag 21483
Query: 241 gccggggcctttgaaaggttttctgctgtgtgtctggcaagctgatgagcaaattcatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21482 gccggggcctttgaaaggttttctgctgtgtgtctggcaagctgatgagcaaattcatga 21423
Query: 301 gataagaccgtagctaacccatcctcattctgacatatcggtaagatgttgctgaagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21422 gataagaccgtagctaacccatcctcattctgacatatcggtaagatgttgctgaagaca 21363
Query: 361 aacactttaccacctggaagcacaaatgcattaggtggtgctcttggatcattgacaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21362 aacactttaccacctggaagcacaaatgcattaggtggtgctcttggatcattgacaata 21303
Query: 421 tgaattttccattgaacatctttcaacaggctttgatccacacttggatcgtgctcagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21302 tgaattttccattgaacatctttcaacaggctttgatccacacttggatcgtgctcagca 21243
Query: 481 gcctccacaatccggtggaaaatcttggtcactttcctcgttaatggatgcgattccggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21242 gcctccacaatccggtggaaaatcttggtcactttcctcgttaatggatgcgattccggt 21183
Query: 541 aggattttccccttagtctcactaagaaccgagttgtaagtgtattggccaatcttgagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21182 aggattttccccttagtctcactaagaaccgagttgtaagtgtattggccaatcttgagt 21123
Query: 601 tcaagtgaccttggcaaccagataaaccttgttctcgcggtaacaggagcctcttctaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21122 tcaagtgaccttggcaaccagataaaccttgttctcgcggtaacaggagcctcttctaaa 21063
Query: 661 tgagtcaaatagaataacgatccggtaccaaacactatagcgaggtatttcctcgaggtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21062 tgagtcaaatagaataacgatccggtaccaaacactatagcgaggtatttcctcgaggtt 21003
Query: 721 ttgtcgaataacagctgtgtgaatgagtttcctgtgcggccattgaatcttttataagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21002 ttgtcgaataacagctgtgtgaatgagtttcctgtgcggccattgaatcttttataagtg 20943
Query: 781 actcttggaat 791
|||||||||||
Sbjct: 20942 actcttggaat 20932
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4670
Number of Sequences: 1807
Number of extensions: 4670
Number of successful extensions: 20
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)